crimelinkage: Statistical Methods for Crime Series Linkage.
BayesPen: (GitHub version)
Bayesian variable selection using penalized credible regions.
BSquare: Bayesian simultanteous quantile regression.
The abba function in the extRemes package contains MCMC code for the spatial max-stable process model
of Stephenson et al (JAMC, 2015) and Reich and Shaby (AOAS, 2012).
Quentin Sebille's package to implement the hierarchical kernel extreme value process (HKEVP) model of Reich and Shaby (AOAS, 2012).
Zhang and Lin's package that includes the adaptive methods of Storlie et al (Statistical Sinica, 2011).
Code for ``Scalar-on-Image Regression via the Soft-Thresholded Gaussian Process'', Biometrika.
Code for ``Fully Bayesian spectral methods for imaging data'', Biometrics.
Code and worked example for ``Integrating multiple data sources in species distribution modeling: A framework for
R code for "Bayesian quantile regression for censored data''.
Code for `` Spatial variable selection methods for investigating acute health effects of fine particulate matter components''.
R code and data the spectral covariates in "A spectral method for spatial downscaling''.
R code for "A spatial capture-recapture model for territorial species''.
Code for "A marginal cure rate proportional hazards model for spatial survival data''.
R code for the kernel model in "A hierarchical model for serially-dependent extremes: A study of heat waves in the western US''.
R code for ``Estimating the historical and future probabilities of large terrorist events'' by Clauset and Woodard.
Reich BJ (2013). Spatiotemporal quantile regression for detecting distributional changes in evironmental processes.. JRSS-C. MCMC code, simulated example, and help file.
Reich BJ (2013). Spatiotemporal quantile regression for detecting distributional changes in environmental processes.
JRSS-C. R code and simulated example for a non-spatial version of this quantile regression model.
Bondell HD, Reich BJ (2013). Consistent high-dimensional Bayesian variable selection via penalized credible regions.. JASA. Code and help file.
Fuentes M, Henry, JH, Reich BJ (2013). Nonparametric Spatial Models for Extremes: Application to Extreme Temperature Data. Extremes. Temperature data, MCMC code, simulated example, and help file.
Reich BJ, Fuentes M (2012). Nonparametric Bayesian models for a spatial covariance. Statistical Methodology . R code and help file.
Reich BJ, Shaby BA(2012). A hierarchical max-stable spatial model for extreme precipitation.
AOAS. MCMC code, simulated example, and help file.
Pati D, Reich BJ, Dunson DB (2011). Bayesian geostatistical modeling with informative sampling locations.
Biometrika. R code and help file and the ozone data.
Reich BJ, Bondell HD, Li L (2011). Sufficient dimension reduction via Bayesian mixture modeling.
Biometrics. R code and help file.
Reich BJ, Bondell HD (2011). A spatial Dirichlet process mixture model for clustering population genetic data.
Biometrics. R code, data, and help file.
Bondell HD, Reich BJ, Wang H (2011). Non-crossing quantile regression curve estimation.
R code and help file.
Reich BJ, Fuentes M, Dunson DB (2012). Bayesian spatial quantile regression.
Journal of the American Statistical Association. R code for the
two-stage model and an illustrative example.
Reich BJ, Bondell DB, Wang H (2009).
Flexible Bayesian quantile regression for independent and clustered data (2010).
Biostatistics. R code for independent and clustered data using the
conditional and marginal model.
Reich BJ, Bandyopadhyay (2009).
A latent factor model for spatial data with informative missingness (2010).
Annals of Applied Statistics. R code
Bondell HD, Reich BJ (2009). Simultaneous factor selection and collapsing of levels in ANOVA
. Biometrics, 69, 169-177. R code
Reich BJ, Storlie CS, Bondell HD (2009).
Variable selection in Bayesian smoothing spline ANOVA models: Application to deterministic computer codes. Technometrics,
51: 110-120. Our R code and
Related R package.
Bondell HD, Reich BJ. (2008)
Simultaneous regression shrinkage, variable selection, and supervised clustering
of predictors with OSCAR. Biometrics, 64: 115-123.
Storlie CB, Bondell HD, Reich BJ, and Zhang HH (2009). Surface Estimation, Variable Selection, and the Nonparametric Oracle Property. Accepted, Statistica Sinica.
R package for survival data
Reich BJ, Fuentes M (2007).
A multivariate semiparametric Bayesian spatial
modeling framework for hurricane surface wind fields
. Annals of Applied Statistics, 1:249-264.
Reich BJ, Hodges JS, Zadnik V (2006). Effects of residual smoothing on the posterior of the
fixed effects in disease-mapping models . Biometrics, 62:1197-1206.
R code for Gaussian and count data,
and a simulated example.
Reich BJ, Hodges JS, Carlin BP, Reich AM (2006).
A Spatial Analysis of Basketball Shot Chart Data. American Statistician, 60: 3-12.