%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% % % EXAMPLE OF USING CUMULATIVE OVERLAYS % % Slides prepared using the LaTeX class seminar with capability % to do animation effects (bring up material on a slide a little % at a time. See below -- usage is pretty much self explanatory. % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% % \documentclass{seminar} \usepackage{psfig,shadow,epsf,sem-a4,fancybox,pstricks,amsthm,amssymb,amsmath} \usepackage{graphicx,psfrag,pst-node,subfigure} \usepackage{fancyheadings} \usepackage{curves} \usepackage{semlayer,semcolor} \slideframe{none} \input{seminar.bug} %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% % % The following are some newcommands I have defined for making % boxes for headings, colors, etc. % % Makes a box around stuff % \def\boxit#1{\vbox{\hrule\hbox{\vrule\kern3pt \vbox{\kern5pt#1\kern5pt}\kern3pt\vrule}\hrule}} % % Maks a heading in a box with a shadow behind it % \newcommand{\myheading}[1]{\begin{center}\shabox{ \slbf{#1}} \end{center}} % % Command so bullets aren't colored \newcommand{\citem}{\item $\mbox{}$} % Command to make colored bullets (red) \newcommand{\ritem}{\item {\red $\mbox{}$}} % % Define some colors % \newgray{vlgray}{0.9} \newrgbcolor{lblue}{0.8 0.92 0.95} \newrgbcolor{lred}{1 0.8 0.8} \newrgbcolor{lyellow}{1 1 0.6} \newrgbcolor{orange}{1 0.7 0.2} \newrgbcolor{lgreen}{0.87 0.95 0.8} %\newrgbcolor{dgreen}{0.37 0.43 0.37} \newrgbcolor{dgreen}{0.36 0.75 0.41} \newrgbcolor{violet}{0.6 0.0 0.4} \newcommand{\SlideColours}[3][black]{ %#1 = frame line color (optional, default=black), %#2 = foreground color, #3 = background color \slideframe[\psset{linecolor=#1,fillcolor=#3,fillstyle=solid}]{scplain} \color{#2}} %example: \SlideColours[red]{black}{Pink} %[] for frames is optional %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% % % Put additional newcommands you want to define here. % % This sets the height of the slide and can be changed % \setlength{\slideheight}{6.6in} % % This makes each slide start at the top rather than being centered % \centerslidesfalse % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% % % CODE TO MAKE ANIMATION EFFECTS (BRING UP BULLETS ONE AT A TIME, ETC) \makeatletter \def\pst@initoverlay#1{% \pst@Verb{% /BeginOL {dup (all) eq exch TheOL le or {IfVisible not {Visible /IfVisible true def} if} {IfVisible {Invisible /IfVisible false def} if} ifelse} def \tx@InitOL /TheOL (#1) def}} \makeatother % turn overlays on or off -- turn off to print handouts! \overlaystrue %\overlaysfalse \begin{document} % with linux uncomment this %\renewcommand{\slideleftmargin}{1.4in} % if you want yellow on black background %\yellow %\SlideColours{white}{black} % makes everything except headings sans serif \sf \newcommand{\slf}{\sf \em} \newcommand{\slbf}{\sf \textbf} \pagestyle{fancy} \setlength{\headrulewidth}{0.15pt} \setlength{\footrulewidth}{.15pt} \rhead{\includegraphics[height=0.3cm]{newlogo.ps}} \lhead{{\scriptsize \sl What is Biostatistics?}} \lfoot{\scriptsize \sl } \cfoot{ } \rfoot{\scriptsize \rm \theslide} \begin{slide} \begin{center} \begin{large} \myheading{{\blue WHAT IS BIOMEDICAL STATISTICS?}} ({\Large {\red \it OR, WHAT IS BIOSTATISTICS}\,?}) \\ \end{large} \vspace*{0.35in} {\bf \large Marie Davidian} \\*[0.1in] \includegraphics[height=0.8cm]{deptlogo.ps} {\tt davidian@stat.ncsu.edu} \end{center} \centering {\tt http://www.stat.ncsu.edu/$\sim$davidian} \end{slide} \begin{slide} \begin{center} \myheading{{\blue Outline}} \end{center} \begin{enumerate} \ritem Biomedical and public health research \ritem Why is studying humans is so complicated? \ritem Example 1: Comparing treatments based on a time-to-event \ritem Example 2: Longitudinal studies with repeated measures \ritem Example 3: Should this study be stopped? \ritem Example 4: Pharmacokinetics \ritem Biostatistical research \ritem Where do biostatisticians work? \ritem Training to be a biostatistician \end{enumerate} \end{slide} % Stuff between \begin{overlay}{n} and \end{overlay} shows on the slide %in the order n=0,1,2,... \begin{slide} \begin{overlay}{0} \begin{center} \myheading{{\blue 1. Biomedical and public health research}} \end{center} \vspace*{0.3in} \slbf{\red Research related to the betterment of human health:} \end{overlay} \begin{overlay}{1} \begin{itemize} \ritem An enormous enterprise in the US, involving {\blue \em billions} of dollars \ritem Funded mostly by the {\blue \em federal government} and the {\blue \em pharmaceutical industry} \end{itemize} \end{overlay} \end{slide} \begin{slide} \slbf{\red Broad goal:} To acquire new knowledge to help prevent, detect, diagnose, and treat {\blue \em disease} \begin{itemize} \ritem Cancer, heart disease, diabetes, HIV/AIDS, mental illness to the common cold, flu, athlete's foot! \ritem Develop new drugs and other therapies to {\blue \em treat} disease \ritem Uncover factors and behaviors that are associated with {\blue \em developing} disease and thus how to {\blue \em prevent} disease \ritem Understand the {\blue \em manifestation} and {\blue \em course} of disease \ritem Develop new devices and procedures for {\blue \em detecting} and {\blue \em monitoring} disease \end{itemize} \end{slide} \begin{slide} \begin{overlay}{0} \slbf{\red National Institutes of Health (NIH):} The government agency responsible for coordinating most health-related research funded by the US Government \begin{itemize} \ritem Budget of over \$23 {\blue \em billion} in 2002 \ritem Mainly for {\blue \em grants} to researchers in universities, research institutes, hospitals to carry out studies addressing these issues \ritem Research on {\blue \em all aspects}\,: prevention, detection, diagnosis, and treatment \end{itemize} \end{overlay} \vspace*{0.1in} \begin{overlay}{1} \slbf{\red Pharmaceutical and biotechnology industries:} \begin{itemize} \ritem Focused mostly on {\blue \em developing new therapies} for prevention and treatment \ritem {\blue \em Huge} investment in money, effort, and people \end{itemize} \end{overlay} \end{slide} \begin{slide} \slbf{\red Scope of research:} \begin{itemize} \ritem {\blue \em Laboratory}\,: identifying compounds, understanding workings of cells, etc. \ritem {\blue \em Animal studies}\,: use animals as {\blue \em models} for humans \item {\yellow$\mbox{}$} {\blue \em Human studies}\,: {\blue \em experimental} or {\blue \em observational} \end{itemize} \end{slide} \begin{slide} \slbf{\red Experimental biomedical studies:} {\blue \em Clinical trials} \begin{itemize} \ritem Evaluation of treatments in a {\blue \em controlled} setting \ritem Is a new headache medication safe? Does a new anti-fungal medication cure athlete's foot? Does a new drug for treating HIV-infected patients work better than an older one? Does hormonal therapy reduce the risk of breast cancer? \ldots \ritem Studies in which the participants receive treatments according to a {\blue \em controlled plan} \end{itemize} \end{slide} \begin{slide} \slbf{\red In the news recently:} The {\blue \em Women's Health Initiative} (WHI) \begin{itemize} \ritem A 15-year research program funded by the {\blue \em National Heart, Lung, and Blood Institute} (NHLBI) \ritem {\blue \em Estrogen+Progestin study}\,: A {\blue \em clinical trial} to test the risks and benefits of using this therapy versus not \ritem 16,608 women ages 50 to 79 years were {\blue \em randomly assigned} to take E+P or a {\blue \em placebo} and monitored periodically for disease \ritem {\blue \em Analysis}\,: Compare rates of disease in the 2 groups \ritem {\blue \em Stopped} due to an increased risk of {\blue \em invasive breast cancer} for E+P \end{itemize} \end{slide} \begin{slide} \slbf{\red Public health research:} {\blue \em Epidemiology} \begin{itemize} \ritem Study of the {\blue \em causes and origins} of disease \ritem Second-hand smoke and lung cancer, Air pollution and respiratory illness, Diet and heart disease, \ldots \ritem {\blue \em Common approach}\,: Identify a group of people and {\blue \em observe} their disease status and other factors \ritem Look for {\blue \em associations} between factors and disease that may reflect {\blue \em risk} \ritem {\blue \em Often}\,: Follow {\blue \em over time} \end{itemize} \end{slide} \begin{slide} \slbf{\red Often in the news:} The {\blue \em Framingham Heart Study} \begin{itemize} \ritem Started in 1948, funded by NHLBI \ritem {\blue \em Cohort} of 5,209 men and women ages 30--62 in Framingham MA recruited and given extensive {\blue \em physical exams}, {\blue \em lifestyle interviews} \ritem Return every 2 years for {\blue \em medical history}, {\blue \em physical exam}, and {\blue \em lab tests} \ritem In 1971, the study enrolled a {\blue \em 2nd-generation cohort}\,: 5,124 of the original participants' adult children and spouses \ritem {\blue \em Objective}\,: Understand {\blue \em causes} and {\blue \em risk factors} associated with {\blue \em cardiovascular disease} (CVD) \ritem Identification of major CVD risk factors, including high blood pressure, high blood cholesterol, smoking, inactivity, \ldots \ritem Currently recruiting a {\blue \em 3rd-generation cohort} of 3,500 grandchildren to facilitate study of {\blue \em genetic factors} \ritem Evaluation of new {\blue \em diagnostic technologies} like echocardiography \end{itemize} \end{slide} \begin{slide} \vspace*{0.3in} \begin{overlay}{0} \slbf{\red Little-known fact I:} {\blue \em Statisticians} have played and continue to play a {\blue \em key role} in almost all of this! \end{overlay} \begin{overlay}{1} \begin{itemize} \ritem {\blue \em Design} of studies \ritem {\blue \em Analysis} of data \ritem Basis for {\blue \em regulatory} requirements of the {\blue \em US FDA} \end{itemize} \end{overlay} \vspace*{0.1in} \begin{overlay}{2} \slbf{\red Little-known fact II:} Interpreting the results of such studies requires {\blue \em specialized statistical methods} \begin{itemize} \ritem \ldots because of the special {\blue \em challenges} involved in studying humans! \end{itemize} \end{overlay} \vspace*{0.1in} \begin{overlay}{2} \slbf{\red Biomedical statistics or biostatistics:} {\blue \em The field of application of statistics to address problems in biomedical and public health research} \end{overlay} \end{slide} \begin{slide} \begin{center} \myheading{{\blue 2. Why is studying humans is so complicated?}} \end{center} \slbf{\red The ``ideal'' agricultural experiment:} Compare {\blue \em yields} of wheat plants for 2 different {\blue \em fertilizers} \begin{itemize} \ritem Plant wheat plants in {\blue \em plots} in a field \ritem Assign plots to receive Fertilizer A or B {\blue \em at random} \ritem Apply assigned fertilizers to plots \ritem Measure {\blue \em wheat yield} for each plot at the end of the growing season \ritem Compare {\blue \em mean wheat yield} for A vs. B by a {\blue \em t-test} \end{itemize} \end{slide} \begin{slide} \begin{overlay}{0} \slbf{\red Features:} \begin{itemize} \ritem Plants actually {\blue \em show up} to be planted in the plots \ritem The experimenter can ensure that the fertilizer {\blue \em actually applied} to a plot is the {\blue \em assigned} fertilizer recorded for that plot \ritem The plants {\blue \em stick around} through the whole study and are there to be {\blue \em measured} at the end \end{itemize} \end{overlay} \vspace*{0.1in} \begin{overlay}{1} \slbf{\red Result:} {\blue \em Data} intended to be collected \begin{itemize} \ritem Are {\blue \em all} available \ritem And thus may be {\blue \em analyzed} according to plan \end{itemize} \end{overlay} \end{slide} \begin{slide} \begin{overlay}{0} \slbf{\red The ``ideal'' human study:} Compare {\blue \em reduction in blood pressure} for two different {\blue \em anti-hypertensive drugs} \end{overlay} \begin{itemize} \begin{overlay}{1} \ritem Subjects are {\blue \em recruited} to take part in the study and asked to show up for {\blue \em baseline} blood pressure reading, recording of {\blue \em demographic information}, and a {\blue \em month's supply} of assigned pills with dosing instructions \end{overlay} \begin{overlay}{2} \ritem {\blue \em All} recruited subjects show up for {\blue \em baseline} reading, {\blue \em provide all requested information}, and {\blue \em take home} supply of pills \end{overlay} \begin{overlay}{3} \ritem {\blue \em All} subjects take their assigned pills {\blue \em exactly according to the instructions} \end{overlay} \begin{overlay}{4} \ritem {\blue \em All} subjects return as directed for {\blue \em monthly} visits to the clinic to {\blue \em receive more pills} and have {\blue \em blood pressure reading} until the end of the study \end{overlay} \end{itemize} \begin{overlay}{5} \vspace*{0.1in} \slbf{\red What's wrong with this picture?} \end{overlay} \end{slide} \begin{slide} \begin{overlay}{0} \slbf{\red Problem:} Humans are {\blue \em notorious} for {\blue \em not doing as they are told}\,! \end{overlay} \begin{itemize} \begin{overlay}{1} \ritem A subject may agree to participate and then {\blue \em change his mind} \end{overlay} \begin{overlay}{2} \ritem A subject may show up for the initial visit but then {\blue \em change her mind} \end{overlay} \begin{overlay}{3} \ritem A subject may show up for the initial visit but {\blue \em refuse to provide} needed information or provide {\blue \em incorrect} information \end{overlay} \begin{overlay}{4} \ritem A subject may not take the pills as {\blue \em directed} (or {\blue \em not all}\,) \end{overlay} \begin{overlay}{5} \ritem A subject may {\blue \em miss} some monthly visits (e.g. vacation) \end{overlay} \begin{overlay}{6} \ritem A subject's physician may recommend she {\blue \em discontinue} participation in the study \end{overlay} \begin{overlay}{7} \ritem A subject may {\blue \em move away} or be hit by a {\blue \em bus} \end{overlay} \begin{overlay}{8} \ritem A subject may {\blue \em die} of a hypertension-related ailment \end{overlay} \end{itemize} \end{slide} \begin{slide} \begin{overlay}{0} \slbf{\red Result:} {\blue \em Data} intended to be collected on humans routinely \begin{itemize} \ritem May be {\blue \em missing} or {\blue \em incomplete} \ritem May be {\blue \em error-prone} \ritem May not reflect {\blue \em what was intended} because subjects may not {\blue \em comply} with their treatment \end{itemize} \end{overlay} \vspace*{0.1in} \begin{overlay}{1} \slbf{\red Implications:} \begin{itemize} \ritem It is {\blue \em unlikely} that the data may be analyzed according to the initial plan \ritem {\blue \em Specialized} analysis methods are required to take into account these ``{\blue \em human}\,'' problems \ritem In fact, {\blue \em designs} for studies that {\blue \em anticipate} these problems are needed \end{itemize} \end{overlay} \vspace*{0.1in} \begin{overlay}{2} \slbf{\red Biostatistics}\ldots \end{overlay} \end{slide} \begin{slide} \begin{center} \myheading{{\blue 3. Comparing treatments based on a time-to-event}} \end{center} \slbf{\red Evaluation and comparison of treatments in clinical trials:} \begin{itemize} \ritem {\blue \em Randomization} of a fixed number subjects to treatments \ritem For each subject, observe a {\blue \em response} \ritem Evaluate or compare on the basis of some summary of the response, like the {\blue \em mean} \ritem The response is called the {\blue \em primary endpoint} \end{itemize} \end{slide} \begin{slide} \slbf{\red For chronic diseases:} Cancer, HIV, diabetes,\ldots \begin{itemize} \ritem The {\blue \em primary endpoint} on which evaluation is based is a {\blue \em time until an event occurs} \ritem ``{\blue \em Survival}\,'' \ritem Time from {\blue \em initiation of treatment to death} for lung cancer patients \ritem Time from {\blue \em initiation of treatment until an AIDS-defining event} for HIV-infected patients \ritem Time from {\blue \em initiation of treatment until myocardial infarction or death} for patients with CVD \ritem {\blue \em Objectives}\,: {\blue \em Summarize} and {\blue \em compare} the {\blue \em distributions} of times-to-event for each treatment \end{itemize} \end{slide} \begin{slide} \slbf{\red Further complication:} \begin{itemize} \ritem The study occurs over a {\blue \em finite period of time} (e.g. 3--5 years) \ritem Logistically, subjects in a clinical trial cannot be recruited {\blue \em all at once} \ritem Instead, subjects are recruited as they become {\blue \em available} \ritem Some subjects enter the study {\blue \em early} \ritem Others enter when the study is nearing an {\blue \em end} \ritem ``{\blue \em Staggered entry}\,'' \end{itemize} \end{slide} \begin{slide} \setlength{\unitlength}{1in} \begin{picture}(5,2) \begin{overlay}{0} \put(0.3,0.25){\makebox(0,0){\red Study}} \put(0.3,0.15){\makebox(0,0){\red starts}} \put(1.8,0.25){\makebox(0,0){\red Study}} \put(1.8,0.15){\makebox(0,0){\red ends}} \put(0.3,0.5){\line(1,0){1.5}} \put(0.3,0.5){\line(0,1){1.5}} \put(1.8,0.5){\line(0,1){1.5}} \put(1.25,1.0){\circle*{0.05}} \put(1.25,1.0){\line(1,0){0.45}} \put(1.7,1.0){\blue \circle{0.05}} \put(0.5,1.75){\circle*{0.05}} \put(0.5,1.75){\line(1,0){0.65}} \put(1.15,1.75){\makebox(0,0){\red x}} \put(1.0,1.25){\circle*{0.05}} \put(1.0,1.25){\line(1,0){0.25}} \put(1.25,1.25){\makebox(0,0){\red x}} \put(0.75,1.5){\circle*{0.05}} \put(0.75,1.5){\line(1,0){1.35}} \put(2.10,1.5){\makebox(0,0){\red x}} \end{overlay} \begin{overlay}{1} \put(2.5,1.75){\circle*{0.05}} \put(2.5,1.75){\line(1,0){0.65}} \put(3.15,1.75){\makebox(0,0){\red x}} \put(2.5,1.5){\circle*{0.05}} \put(2.5,1.5){\line(1,0){1.05}} \put(3.55,1.5){\blue \circle{0.05}} \put(2.5,1.25){\circle*{0.05}} \put(2.5,1.25){\line(1,0){0.25}} \put(2.75,1.25){\makebox(0,0){\red x}} \put(2.5,0.25){\makebox(0,0){\red Time 0}} \put(2.5,0.5){\line(1,0){1.5}} \put(2.5,0.5){\line(0,1){1.5}} \put(2.5,1.0){\circle*{0.05}} \put(2.5,1.0){\line(1,0){0.45}} \put(2.95,1.0){\blue \circle{0.05}} \end{overlay} \end{picture} \begin{overlay}{0} \hspace*{0.5in} {\blue \em Calendar Time} \end{overlay} \begin{overlay}{1} \hspace{1.25in} {\blue \em Patient Time} \end{overlay} \end{slide} \begin{slide} \begin{overlay}{0} \slbf{\red Result:} {\blue \em Censoring} \begin{itemize} \ritem For some subjects, regardless of {\blue \em time of entry}, we do not observe the endpoint due to {\blue \em competing causes}, e.g. hit by a bus \ritem For some subjects entering the study {\blue \em late}, the study may {\blue \em end} before the endpoint happens \ritem The endpoint is {\blue \em censored} for these subjects \end{itemize} \end{overlay} \vspace*{0.1in} \begin{overlay}{1} \slbf{\red Analysis:} \begin{itemize} \ritem {\blue \em Ignoring} the censored data (throw those subjects out) leads to {\blue \em inaccurate} picture of survival \ritem {\blue \em Needed}\,: Methods for {\blue \em fair} summary and comparison that take {\blue \em censoring} into account \ritem {\blue \em Survival Analysis} \end{itemize} \end{overlay} \end{slide} \begin{slide} \begin{overlay}{0} \begin{center} \myheading{{\blue 4. Longitudinal studies with repeated measures}} \end{center} \slbf{\red Often}\,: Questions of interest have to do with how something {\blue \em changes over time} \begin{itemize} \ritem Diet medications and weight loss \ritem Cholesterol-lowering drugs \ritem Anti-hypertensive medications \ritem HIV viral load following antiretroviral therapy \ritem Prostate-specific antigen for monitoring prostate cancer recurrence \ritem {\blue \em How} does it change? {\blue \em Rate} of change? {\blue \em Different} for different treatments? \end{itemize} \end{overlay} \begin{overlay}{1} \slbf{\red A BIG problem:} Subjects {\blue \em drop out} of the study \end{overlay} \end{slide} %\begin{slide} %\begin{center} %\includegraphics[height=2.8in]{dental.ps} %\end{center} %\end{slide} %\begin{slide} %\begin{center} %\includegraphics[height=2.8in]{hiv.ps} %\end{center} %\end{slide} %\begin{slide} %\begin{center} %\includegraphics[height=2.8in]{q.ps} %\end{center} %\end{slide} \begin{slide} \slbf{\red Needed:} \begin{itemize} \ritem A {\blue \em statistical model} in which the question can be formally stated \ritem With analysis methods to take into account that the data are {\blue \em repeated measurements} on the {\blue \em same subjects} \ritem \ldots And that subjects tend to {\blue \em drop out} \ritem {\blue \em Longitudinal data analysis} \end{itemize} \end{slide} \begin{slide} \begin{overlay}{0} \begin{center} \myheading{{\blue 5. Should this study be stopped?}} \end{center} \slbf{\red Recall:} The {\blue \em WHI estrogen+progestin trial} \begin{itemize} \ritem Was {\blue \em stopped} due to increased breast cancer risk \ritem {\blue \em How was this decision made}\,? \ritem {\blue \em Data Safety Monitoring Board}\,: includes physicians, ethicists, patient advocates, and {\blue \em statisticians} (DSMB) \ritem DSMB meets periodically, reviews data {\blue \em available so far}, makes a {\blue \em decision} whether to continue or stop \ritem Today, it is {\blue \em routine} (and sometimes {\blue \em required}\,) for a clinical trial to have a DSMB \end{itemize} \end{overlay} \vspace*{0.1in} \begin{overlay}{1} \slbf{\red How is the decision made?} \end{overlay} \end{slide} \begin{slide} \begin{overlay}{0} \slbf{\red Why stop?} \begin{itemize} \ritem Serious {\blue \em adverse events} \ritem Overwhelming {\blue \em superiority} of one treatment \ritem {\blue \em No apparent difference} between treatments \ritem Logistical or design problems {\blue \em too difficult} to fix \ritem Clinical trials are {\blue \em expensive} \end{itemize} \end{overlay} \vspace*{0.1in} \begin{overlay}{1} \slbf{\red How to stop?} Need a {\blue \em formal set of rules} for stopping {\blue \em early} \end{overlay} \end{slide} \begin{slide} \begin{overlay}{0} \slbf{\red Ordinarily:} Do a study, collect {\blue \em all} data, analyze at the end \begin{itemize} \ritem Single {\blue \em hypothesis test} at level of significance $\alpha$ \end{itemize} \end{overlay} \vspace*{0.1in} \begin{overlay}{1} \slbf{\red Here:} Look at data {\blue \em sequentially} \begin{itemize} \ritem DSMB meets, looks at {\blue \em partial} data so far \ritem {\blue \em Interim} hypothesis test to look at the difference based on partial data \ritem If trial is {\blue \em never} stopped, want level of significance $\alpha$ at the end \ritem {\blue \em How large} does the test statistic need to be at an ``{\blue \em interim look}\,'' (all data not available) so that at the end, the chance we would make a mistake is $\leq \alpha$? \ritem {\blue \em Group sequential statistical methods} for design and analysis \end{itemize} \end{overlay} \end{slide} \begin{slide} \begin{center} \myheading{{\blue 6. Pharmacokinetics}} \end{center} \slbf{\red How does a drug work?} From a {\blue \em pharmacologist's point of view} \begin{itemize} \ritem Achieve {\blue \em therapeutic objective} \ritem Minimize {\blue \em problems} \ritem Come up with {\blue \em dosing regimen} to do this \ritem How {\blue \em much}\,? How {\blue \em often}\,? Under what {\blue \em conditions}\,? \ritem Need to understand ``{\blue \em what the body does to the drug}\,'' \end{itemize} \end{slide} \begin{slide} \vspace*{0.75in} \hspace*{-0.4in} \setlength{\unitlength}{1in} \begin{picture}(6,1) \put(0.5,0.5){\framebox(1.25,1){\red \it PK}} \put(1.75,1){\red \vector(1,0){1.00}} \put(2.25,1.25){\makebox(0,0){\blue concentration}} \put(2.75,0.5){\framebox(1.25,1){\red \it PD}} \put(0,1){\red \vector(1,0){0.5}} \put(4.0,1){\red \vector(1,0){0.5}} \put(0.25,1.25){\makebox(0,0){\blue dose}} \put(4.30,1.25){\makebox(0,0){\blue response}} \end{picture} \end{slide} \begin{slide} \slbf{\red What goes on inside:} {\blue \em Absorption, Distribution, Metabolism, Elimination} \vspace*{0.15in} %\begin{center} %\includegraphics[height=2.0in]{processes.ps} %\end{center} \vspace*{0.15in} \slbf{\red Routes of drug administration:} {\blue \em Intravenously}, {\blue \em Intramuscularly}, {\blue \em Subcutaneously}, {\blue \em Orally}, \ldots \end{slide} \begin{slide} \slbf{\red Data for 4 subjects given same oral dose of anti-asthmatic theophylline:} %\begin{center} %\includegraphics[height=2.8in]{theo.ps} %\end{center} \end{slide} \begin{slide} \slbf{\red One-compartment model with first-order absorption, elimination:} oral dose $D$ \vspace*{0.1in} \begin{center} \setlength{\unitlength}{0.9in} \begin{picture}(4,1) \put(-0.01,0.5){\makebox(0,0){$D$}} \put(1,0){\framebox(2,1){$X(t)$}} \put(3,0.5){\vector(1,0){0.75}} \put(0.25,0.5){\vector(1,0){0.75}} \put(3.3,0.25){\makebox(0,0){$k_{e}$}} \put(0.5,0.25){\makebox(0,0){$k_{a}$}} \end{picture} \vspace{0.1in} \begin{eqnarray*} \begin{array}{rcll} \displaystyle \frac{dX(t)}{dt}& = & k_{a}X_{a}(t)-k_{e}X(t), & X(0)=0 \\*[0.08in] \displaystyle \frac{dX_{a}(t)}{dt} & = & -k_{a}X_{a}(t), & X_{a}(0)=FX(0) \end{array} \end{eqnarray*} $$\hspace*{-0.3in}X(t) \mbox{ = amount in ``blood'' compartment}, \mbox{ }X_{a}(t) \mbox{ = amount at absorption site}$$ \vspace*{-0.07in} $$C(t) = \frac{X(t)}{V} = \frac{k_{a}DF}{V(k_{a}-k_{e})}\{\exp(-k_{e}t)-\exp(-k_{a}t)\},$$ $$V \mbox{ = ``{\blue \em volume}\,'' of compartment}$$ \end{center} \end{slide} \begin{slide} \begin{overlay}{0} \slbf{\red Pharmacokinetics:} Learn about {\blue \em pharmacokinetic parameters} like $k_a$, $k_e$, $V$ that {\blue \em govern} how concentrations arise \begin{itemize} \ritem For {\blue \em individual} subjects \ritem And how {\blue \em variable} they are across subjects \end{itemize} \end{overlay} \vspace*{0.1in} \begin{overlay}{1} \slbf{\red Needed:} \begin{itemize} \ritem A {\blue \em statistical model} that allows each subject to have his/her {\blue \em own} parameters \ritem And describes how these {\blue \em vary} \ritem \ldots From which the parameters and their variability can be {\blue \em estimated} \ritem {\blue \em Nonlinear mixed effects models} \end{itemize} \end{overlay} \end{slide} \begin{slide} \begin{center} \myheading{{\blue 7. Biostatistical research}} \end{center} \slbf{\red Biomedical and public health research:} \begin{itemize} \ritem {\blue \em Statistics} plays an {\blue \em indispensable} role \ritem {\blue \em New challenges} require {\blue \em new methods} \ritem {\blue \em Research} to develop new methods is required \ritem Such research is {\blue \em supported} by {\blue \em grants} to provide biostatistical researchers {\blue \em time}, {\blue \em computing support}, and {\blue \em research assistants} (aka {\blue \em graduate students}) \ritem Theoretical properties, computer simulations, tests on data from real studies \end{itemize} \end{slide} \begin{slide} \begin{center} \myheading{{\blue 8. Where do biostatisticians work?}} \end{center} \begin{overlay}{0} \slbf{\red Everywhere biomedical and public health research takes place:} \begin{itemize} \ritem {\blue \em Pharmaceutical industry} \ritem Industry {\blue \em supporting} the pharmaceutical industry, {\blue \em contract research organizations} (CROs, e.g. {\blue \em Quintiles}) \ritem {\blue \em Government}\,: NIH, FDA, NCHS, \ldots \ritem {\blue \em Institutions}\,: E.g., Cancer centers (Sloan-Kettering, Dana-Farber, M.D. Anderson), Medical centers (Mayo Clinic, Cleveland Clinic, Duke Clinical Research Institute) \ritem {\blue \em Academia}\,: {\blue \em Biostatistics} departments in schools of medicine or public health, {\blue \em Statistics} departments like this one! \end{itemize} \end{overlay} \vspace*{0.1in} \begin{overlay}{1} \slbf{\red Opportunities:} {\blue \em There is a serious and growing shortage of biostatisticians with advanced degrees}\,! \end{overlay} \end{slide} \begin{slide} \begin{overlay}{0} \begin{center} \myheading{{\blue 9. Training to be a biostatistician}} \end{center} \slbf{\red Background:} {\blue \em Undergraduate} training in \begin{itemize} \ritem Statistics, mathematics, engineering, biological sciences \end{itemize} \end{overlay} \vspace*{0.1in} \begin{overlay}{1} \slbf{\red Where?} Departments of {\blue \em biostatistics} or {\blue \em statistics} \begin{itemize} \ritem Advantage of biostatistics department: {\blue \em Proximity} to medical and public health research \ritem Advantage of statistics department: Often more theoretical {\blue \em foundations} in curricula \end{itemize} \end{overlay} \begin{overlay}{2} \slbf{\red Degrees:} Masters and Doctoral \end{overlay} \end{slide} \begin{slide} \begin{overlay}{0} e\slbf{\red Coursework:} {\blue \em Bread and butter} \begin{itemize} \ritem Survival analysis \ritem Longitudinal data analysis \ritem Categorical data analysis \ritem Clinical trials and epidemiology \end{itemize} \end{overlay} \vspace*{0.1in} \begin{overlay}{1} \slbf{\red Coursework:} {\blue \em Specialized} \begin{itemize} \ritem Missing data methods \ritem Statistical computing \ritem Genetics/genomics \ritem Advanced statistical modeling \end{itemize} \end{overlay} \end{slide} \begin{slide} \slbf{\red Practical experience:} {\blue \em Very desirable}\,! \begin{itemize} \ritem {\blue \em Graduate Industrial Traineeship}\,: Work in pharmaceutical industry, research institutions \ritem{\blue \em Research Assistantship} \end{itemize} \end{slide} \begin{slide} \begin{center} \myheading{{\blue 10. Concluding remarks}} \end{center} \slbf{\red Biostatistics:} A {\blue \em huge} field with {\blue \em many opportunities} \begin{itemize} \ritem Chance to apply quantitative skills and training to {\blue \em betterment of human health} \ritem Chance to work a part of a {\blue \em team} with physicians and other experts \ritem {\blue \em Huge shortage} means lots of opportunities \end{itemize} \end{slide} \end{document}